RNA-Seq Data Analysis in Galaxy - Institut Curie
Chapitre D'ouvrage Année : 2021

RNA-Seq Data Analysis in Galaxy

Résumé

A complete RNA-Seq analysis involves the use of several different tools, with substantial software and computational requirements. The Galaxy platform simplifies the execution of such bioinformatics analyses by embedding the needed tools in its web interface, while also providing reproducibility. Here, we describe how to perform a reference-based RNA-Seq analysis using Galaxy, from data upload to visualization and functional enrichment analysis of differentially expressed genes.
Fichier principal
Vignette du fichier
10.1007%2F978-1-0716-1307-8_20.pdf (1 Mo) Télécharger le fichier
Origine Fichiers éditeurs autorisés sur une archive ouverte
licence

Dates et versions

hal-04645142 , version 1 (04-09-2024)

Licence

Identifiants

Citer

Bérénice Batut, Marius van den Beek, Maria Doyle, Nicola Soranzo. RNA-Seq Data Analysis in Galaxy. RNA Bioinformatics, 2284, Springer US, pp.367-392, 2021, Methods in Molecular Biology, ⟨10.1007/978-1-0716-1307-8_20⟩. ⟨hal-04645142⟩
13 Consultations
4 Téléchargements

Altmetric

Partager

More